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Convert a huge txt-file into a dataset


How do you deal with very large datasets in Mathematica?Dealing with a huge datasetHow can I add a column into a existing Dataset?how to create Dataset after importing txt fileHow to SemanticImport Multiple Excel SheetsHow to convert this .txt data into a list of pointsconvert from a dataset to listImport Stackoverflow data and convert it into datasetConvert Matrix into a long form DatasetWhat's the best way to import such dataset?













3












$begingroup$


My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.



After importing it this file a used StringSplit to separate it into rows, then to singular elements



rawData = Import["rawData.txt"];
splitRawData = StringSplit[rawData, "%%"];
dataIwant = splitRawData[[19]];
FullForm[dataIwant];
splitDataIntoRows = StringSplit[dataIwant, "n"];
splitData1 = StringSplit[splitDataIntoRows, " "];


I want to use this function to split the data into 6 columns.



convertListToAssociation = 
list [Function]
AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
"T_dw (deg C)", "delta_w", "delta_T", list]


What are further steps to be taken?










share|improve this question









$endgroup$
















    3












    $begingroup$


    My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.



    After importing it this file a used StringSplit to separate it into rows, then to singular elements



    rawData = Import["rawData.txt"];
    splitRawData = StringSplit[rawData, "%%"];
    dataIwant = splitRawData[[19]];
    FullForm[dataIwant];
    splitDataIntoRows = StringSplit[dataIwant, "n"];
    splitData1 = StringSplit[splitDataIntoRows, " "];


    I want to use this function to split the data into 6 columns.



    convertListToAssociation = 
    list [Function]
    AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
    "T_dw (deg C)", "delta_w", "delta_T", list]


    What are further steps to be taken?










    share|improve this question









    $endgroup$














      3












      3








      3





      $begingroup$


      My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.



      After importing it this file a used StringSplit to separate it into rows, then to singular elements



      rawData = Import["rawData.txt"];
      splitRawData = StringSplit[rawData, "%%"];
      dataIwant = splitRawData[[19]];
      FullForm[dataIwant];
      splitDataIntoRows = StringSplit[dataIwant, "n"];
      splitData1 = StringSplit[splitDataIntoRows, " "];


      I want to use this function to split the data into 6 columns.



      convertListToAssociation = 
      list [Function]
      AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
      "T_dw (deg C)", "delta_w", "delta_T", list]


      What are further steps to be taken?










      share|improve this question









      $endgroup$




      My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.



      After importing it this file a used StringSplit to separate it into rows, then to singular elements



      rawData = Import["rawData.txt"];
      splitRawData = StringSplit[rawData, "%%"];
      dataIwant = splitRawData[[19]];
      FullForm[dataIwant];
      splitDataIntoRows = StringSplit[dataIwant, "n"];
      splitData1 = StringSplit[splitDataIntoRows, " "];


      I want to use this function to split the data into 6 columns.



      convertListToAssociation = 
      list [Function]
      AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
      "T_dw (deg C)", "delta_w", "delta_T", list]


      What are further steps to be taken?







      string-manipulation data dataset data-structures






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked 4 hours ago









      Artem AnisimovArtem Anisimov

      342




      342




















          2 Answers
          2






          active

          oldest

          votes


















          2












          $begingroup$

          You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.



          data = Import[
          "rawData.txt",
          "Table",
          "HeaderLines" -> 19
          ];

          columns = Transpose[Developer`ToPackedArray[N[data]]];


          I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.






          share|improve this answer









          $endgroup$




















            1












            $begingroup$

            A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this



            rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
            textLines = StringSplit[rawData, "n"];
            dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];


            We used ToExpression to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this



            poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
            poor[-39999.8]


            If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this



            better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);


            Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this



            getData[kyr_] := better[Round[10 kyr]]
            getData[-3999.8123]

            (* 68.766, 27.806, 4.047, -1.184, 2.377 *)


            Alternate versions of getData could interpolate the data or just give specific columns.






            share|improve this answer









            $endgroup$













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              2 Answers
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              2 Answers
              2






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              active

              oldest

              votes






              active

              oldest

              votes









              2












              $begingroup$

              You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.



              data = Import[
              "rawData.txt",
              "Table",
              "HeaderLines" -> 19
              ];

              columns = Transpose[Developer`ToPackedArray[N[data]]];


              I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.






              share|improve this answer









              $endgroup$

















                2












                $begingroup$

                You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.



                data = Import[
                "rawData.txt",
                "Table",
                "HeaderLines" -> 19
                ];

                columns = Transpose[Developer`ToPackedArray[N[data]]];


                I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.






                share|improve this answer









                $endgroup$















                  2












                  2








                  2





                  $begingroup$

                  You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.



                  data = Import[
                  "rawData.txt",
                  "Table",
                  "HeaderLines" -> 19
                  ];

                  columns = Transpose[Developer`ToPackedArray[N[data]]];


                  I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.






                  share|improve this answer









                  $endgroup$



                  You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.



                  data = Import[
                  "rawData.txt",
                  "Table",
                  "HeaderLines" -> 19
                  ];

                  columns = Transpose[Developer`ToPackedArray[N[data]]];


                  I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.







                  share|improve this answer












                  share|improve this answer



                  share|improve this answer










                  answered 3 hours ago









                  Henrik SchumacherHenrik Schumacher

                  61.8k585172




                  61.8k585172





















                      1












                      $begingroup$

                      A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this



                      rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
                      textLines = StringSplit[rawData, "n"];
                      dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];


                      We used ToExpression to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this



                      poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
                      poor[-39999.8]


                      If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this



                      better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);


                      Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this



                      getData[kyr_] := better[Round[10 kyr]]
                      getData[-3999.8123]

                      (* 68.766, 27.806, 4.047, -1.184, 2.377 *)


                      Alternate versions of getData could interpolate the data or just give specific columns.






                      share|improve this answer









                      $endgroup$

















                        1












                        $begingroup$

                        A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this



                        rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
                        textLines = StringSplit[rawData, "n"];
                        dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];


                        We used ToExpression to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this



                        poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
                        poor[-39999.8]


                        If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this



                        better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);


                        Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this



                        getData[kyr_] := better[Round[10 kyr]]
                        getData[-3999.8123]

                        (* 68.766, 27.806, 4.047, -1.184, 2.377 *)


                        Alternate versions of getData could interpolate the data or just give specific columns.






                        share|improve this answer









                        $endgroup$















                          1












                          1








                          1





                          $begingroup$

                          A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this



                          rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
                          textLines = StringSplit[rawData, "n"];
                          dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];


                          We used ToExpression to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this



                          poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
                          poor[-39999.8]


                          If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this



                          better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);


                          Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this



                          getData[kyr_] := better[Round[10 kyr]]
                          getData[-3999.8123]

                          (* 68.766, 27.806, 4.047, -1.184, 2.377 *)


                          Alternate versions of getData could interpolate the data or just give specific columns.






                          share|improve this answer









                          $endgroup$



                          A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this



                          rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
                          textLines = StringSplit[rawData, "n"];
                          dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];


                          We used ToExpression to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this



                          poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
                          poor[-39999.8]


                          If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this



                          better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);


                          Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this



                          getData[kyr_] := better[Round[10 kyr]]
                          getData[-3999.8123]

                          (* 68.766, 27.806, 4.047, -1.184, 2.377 *)


                          Alternate versions of getData could interpolate the data or just give specific columns.







                          share|improve this answer












                          share|improve this answer



                          share|improve this answer










                          answered 2 hours ago









                          LouisBLouisB

                          4,6891717




                          4,6891717



























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