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Convert a huge txt-file into a dataset
How do you deal with very large datasets in Mathematica?Dealing with a huge datasetHow can I add a column into a existing Dataset?how to create Dataset after importing txt fileHow to SemanticImport Multiple Excel SheetsHow to convert this .txt data into a list of pointsconvert from a dataset to listImport Stackoverflow data and convert it into datasetConvert Matrix into a long form DatasetWhat's the best way to import such dataset?
$begingroup$
My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.
After importing it this file a used StringSplit to separate it into rows, then to singular elements
rawData = Import["rawData.txt"];
splitRawData = StringSplit[rawData, "%%"];
dataIwant = splitRawData[[19]];
FullForm[dataIwant];
splitDataIntoRows = StringSplit[dataIwant, "n"];
splitData1 = StringSplit[splitDataIntoRows, " "];
I want to use this function to split the data into 6 columns.
convertListToAssociation =
list [Function]
AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
"T_dw (deg C)", "delta_w", "delta_T", list]
What are further steps to be taken?
string-manipulation data dataset data-structures
$endgroup$
add a comment |
$begingroup$
My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.
After importing it this file a used StringSplit to separate it into rows, then to singular elements
rawData = Import["rawData.txt"];
splitRawData = StringSplit[rawData, "%%"];
dataIwant = splitRawData[[19]];
FullForm[dataIwant];
splitDataIntoRows = StringSplit[dataIwant, "n"];
splitData1 = StringSplit[splitDataIntoRows, " "];
I want to use this function to split the data into 6 columns.
convertListToAssociation =
list [Function]
AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
"T_dw (deg C)", "delta_w", "delta_T", list]
What are further steps to be taken?
string-manipulation data dataset data-structures
$endgroup$
add a comment |
$begingroup$
My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.
After importing it this file a used StringSplit to separate it into rows, then to singular elements
rawData = Import["rawData.txt"];
splitRawData = StringSplit[rawData, "%%"];
dataIwant = splitRawData[[19]];
FullForm[dataIwant];
splitDataIntoRows = StringSplit[dataIwant, "n"];
splitData1 = StringSplit[splitDataIntoRows, " "];
I want to use this function to split the data into 6 columns.
convertListToAssociation =
list [Function]
AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
"T_dw (deg C)", "delta_w", "delta_T", list]
What are further steps to be taken?
string-manipulation data dataset data-structures
$endgroup$
My friend has this huge txt-log of sea levels. He wants to organize it into a dataset.
After importing it this file a used StringSplit to separate it into rows, then to singular elements
rawData = Import["rawData.txt"];
splitRawData = StringSplit[rawData, "%%"];
dataIwant = splitRawData[[19]];
FullForm[dataIwant];
splitDataIntoRows = StringSplit[dataIwant, "n"];
splitData1 = StringSplit[splitDataIntoRows, " "];
I want to use this function to split the data into 6 columns.
convertListToAssociation =
list [Function]
AssociationThread["Time (kyr BP)", "Sea level (m)", "T_NH(deg C)",
"T_dw (deg C)", "delta_w", "delta_T", list]
What are further steps to be taken?
string-manipulation data dataset data-structures
string-manipulation data dataset data-structures
asked 4 hours ago
Artem AnisimovArtem Anisimov
342
342
add a comment |
add a comment |
2 Answers
2
active
oldest
votes
$begingroup$
You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.
data = Import[
"rawData.txt",
"Table",
"HeaderLines" -> 19
];
columns = Transpose[Developer`ToPackedArray[N[data]]];
I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.
$endgroup$
add a comment |
$begingroup$
A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this
rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
textLines = StringSplit[rawData, "n"];
dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];
We used ToExpression
to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this
poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
poor[-39999.8]
If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this
better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);
Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this
getData[kyr_] := better[Round[10 kyr]]
getData[-3999.8123]
(* 68.766, 27.806, 4.047, -1.184, 2.377 *)
Alternate versions of getData
could interpolate the data or just give specific columns.
$endgroup$
add a comment |
Your Answer
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2 Answers
2
active
oldest
votes
2 Answers
2
active
oldest
votes
active
oldest
votes
active
oldest
votes
$begingroup$
You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.
data = Import[
"rawData.txt",
"Table",
"HeaderLines" -> 19
];
columns = Transpose[Developer`ToPackedArray[N[data]]];
I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.
$endgroup$
add a comment |
$begingroup$
You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.
data = Import[
"rawData.txt",
"Table",
"HeaderLines" -> 19
];
columns = Transpose[Developer`ToPackedArray[N[data]]];
I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.
$endgroup$
add a comment |
$begingroup$
You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.
data = Import[
"rawData.txt",
"Table",
"HeaderLines" -> 19
];
columns = Transpose[Developer`ToPackedArray[N[data]]];
I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.
$endgroup$
You actually should work with arrays in this case as the dataset is quite large. You can import the table in one go as follows.
data = Import[
"rawData.txt",
"Table",
"HeaderLines" -> 19
];
columns = Transpose[Developer`ToPackedArray[N[data]]];
I extracted only the data columns without column titles so that they can be stored in a packed array. This should speed up considerably further working with the data.
answered 3 hours ago
Henrik SchumacherHenrik Schumacher
61.8k585172
61.8k585172
add a comment |
add a comment |
$begingroup$
A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this
rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
textLines = StringSplit[rawData, "n"];
dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];
We used ToExpression
to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this
poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
poor[-39999.8]
If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this
better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);
Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this
getData[kyr_] := better[Round[10 kyr]]
getData[-3999.8123]
(* 68.766, 27.806, 4.047, -1.184, 2.377 *)
Alternate versions of getData
could interpolate the data or just give specific columns.
$endgroup$
add a comment |
$begingroup$
A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this
rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
textLines = StringSplit[rawData, "n"];
dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];
We used ToExpression
to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this
poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
poor[-39999.8]
If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this
better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);
Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this
getData[kyr_] := better[Round[10 kyr]]
getData[-3999.8123]
(* 68.766, 27.806, 4.047, -1.184, 2.377 *)
Alternate versions of getData
could interpolate the data or just give specific columns.
$endgroup$
add a comment |
$begingroup$
A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this
rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
textLines = StringSplit[rawData, "n"];
dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];
We used ToExpression
to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this
poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
poor[-39999.8]
If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this
better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);
Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this
getData[kyr_] := better[Round[10 kyr]]
getData[-3999.8123]
(* 68.766, 27.806, 4.047, -1.184, 2.377 *)
Alternate versions of getData
could interpolate the data or just give specific columns.
$endgroup$
A slightly different approach is to split the data into lines first, then split each line into fields. Since we know the data begins on line 20, we can do this
rawData = Import["rawData.txt", Path -> NotebookDirectory[]];
textLines = StringSplit[rawData, "n"];
dataIwant = ToExpression[StringSplit /@ textLines[[20 ;;]]];
We used ToExpression
to convert from text strings to numbers. Now we can put the numbers into an association. We probably want to use the first column, time, as our key, but floating point numbers are not good keys. So don't do this
poor = Association @@ (First[#] -> Rest[#] & /@ dataIwant);
poor[-39999.8]
If you get the right answer, it was just luck. A better way to treat this data is to convert the time from floating point kiloyears to integer centuries. Then we can create a better association like this
better = Association @@ (Round[10 First[#]] -> Rest[#] & /@ dataIwant);
Now our keys are exact numbers, but we still want to use kiloyears, so we write a function that converts our time in kiloyears to centuries and rounds off for us, like this
getData[kyr_] := better[Round[10 kyr]]
getData[-3999.8123]
(* 68.766, 27.806, 4.047, -1.184, 2.377 *)
Alternate versions of getData
could interpolate the data or just give specific columns.
answered 2 hours ago
LouisBLouisB
4,6891717
4,6891717
add a comment |
add a comment |
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